{
  "analysis_id": "cptac_ccrcc_tumor_minus_nat",
  "collection": "GOBP-C2",
  "comparison": "paired tumour minus adjacent non-tumour tissue; 80 matched pairs",
  "interpretation": "Adjusted category P tests at least one enriched member set; stars are not direction or magnitude. NES panel is descriptive.",
  "star_thresholds": {
    "*": 0.05,
    "**": 0.01,
    "***": 0.001,
    "****": 0.0001
  },
  "figure": {
    "width_in": 13,
    "height_in": 15.6,
    "dpi": 300,
    "formats": [
      "png",
      "svg",
      "pdf"
    ]
  },
  "source_run_manifest_sha256": "9efda088adf9227efb5295580896e80d934caa83101bd840ab512c37dd6344c1",
  "source_frozen_DE_sha256": "7c55e895cfddec99cae8856b503fcbd7b8714a9916f3295db4ee17ad61767dba",
  "source_GOBP_C2_raw_GSEA_ledger_sha256": "e820e96e6a5fb773d743d6ff710f68525b31129f52e51109055e6f2abdee1d36",
  "old_descriptive_plot_source_sha256": "885e338f33d91720ce440d1d3b5afd3ad750d4465143ee466367aca752870be5",
  "method_code_sha256": "4c30b63d74312523c13f8086a877320f1746989a7b94a07a84b840116a9e0d85",
  "term2gene_sha256": "716576959ec2941c1a7ecf63ff38e765667e3cd2eea3312499c1c2a05211d4a0",
  "family_size": 6673,
  "categories": 40,
  "significant_categories": 31,
  "original_DE_recomputed": false,
  "original_GSEA_recomputed": false,
  "category_inference_recomputed": true,
  "generated_at_utc": "2026-09-25T17:05:02.057238+00:00",
  "source_run_id": "cptac-ccrcc-global-proteomic-standard",
  "figure_identity": "mean NES of individually significant unique category member gene sets; point size = number of such sets; adjusted category P stars from all eligible unique hypotheses",
  "lisaR_renderer": "lisa_plot_hommel_support via lisa_write_support_lollipops; annotation_variant=hommel_support_v1",
  "descriptive_mean_NES_and_member_counts_match_old_manual_source": true,
  "mean_NES_not_a_category_significance_test": true
}